All Functions Used on PO12Q

plotPlane

{rockchalk}

Draw a 3-D regression plot for two predictors

read_excel

{readxl}

Read an Excel file

rename

{dplyr}

Renames columns in a data frame or tibble.

group_by

{dplyr}

Group tibble/data.frame by a factor variable. All further tidyverse operations are performed group-wise

geom_point

{GGPLOT2}

Generates a scatter plot

ggsave

{ggplot2}

Saves the last ggplot or a specified ggplot object to a file

ls

{base}

Return a vector of character strings giving the names of the objects in the specified environment

data.frame

{base}

Create a data.frame from vectors

vcovHC

{sandwich}

Heteroscedasticity-consistent estimation of the covariance matrix of the coefficient estimates

class

{base}

Retrieve class of an R object

recode

{dplyr}

Recode a variable

group_tt

{tinytable}

Grouping in tinytable

scale_x_continuous

{GGPLOT2}

Customise continuous x axis

modelsummary

{modelsummary}

Creates regression and data tables

log

{base}

log (default base = e)

list

{base}

Create a list object

t.test

{stats}

Performs one and two sample t-tests on vectors of data.

ggtitle

{GGPLOT2}

Generates a title for a ggplot graph

read.csv

{utils}

Read a csv file to data frame. Specify stringsAsFactors = FALSE to keep all string columns as characters

library

{base}

Load an R package

colnames

{base}

Retrieve column names of a data frame

setwd

{base}

Set Working Directory

leveneTest

{car}

Computes Levene’s test for homogeneity of variance across groups.

table

{base}

Obtain frequency table of a variable/cross-tabulation of two variables

labs

{GGPLOT2}

Customise labels in GGPLOT2

median

{stats}

Get median of a vector

slice_sample

{dplyr}

Randomly selects rows from a data frame or tibble.

mutate

{dplyr}

Modify/create a column in a data frame

c

{base}

Combine values/vectors into a vector

set.seed

{base}

Initialise a pseudorandom number generator.

theme_latex

{tinytable}

A theme for modelsummary/tinytable tables

prop.test

{stats}

Test of Equal or Given Proportions

theme

{GGPLOT2}

Set theme for GGPLOT2

coeftest

{lmtest}

Inference for Estimated Coefficients

ggplot

{GGPLOT2}

Create a ggplot graph

ylab

{GGPLOT2}

Label the y axis (ggplot)

round

{base}

Rounds numbers

levels

{base}

Get levels of a factor

is.na

{base}

Check if a value is NA/elements of vector are NA

xlab

{GGPLOT2}

Label the x axis (ggplot)

ordered

{dplyr}

Create an ordered factor

cut

{base}

Convert Numeric to Factor

nrow

{base}

Get number of rows of a data frame

droplevels

{base}

Drop Unused Levels from Factors

geom_smooth

{GGPLOT2}

Generates a smoothed conditional means curve / line

geom_hline

{GGPLOT2}

Add a horizontal line in GGPLOT2

sample_frac

{dplyr}

Sample a fraction of observations from a data frame

mean

{base}

Get mean of a vector

vif

{car}

Calculate Variance Inflation Factor

element_line

{GGPLOT2}

Customise line appearance

rm

{base}

Remove objects

dim

{base}

Get dimensions of a data frame

is.element

{base}

Check if a value is element of a vector

confint

{stats}

Calculate confidence Intervals for Model Parameters

subset

{base}

Return subsets of vectors, matrices or data frames which meet conditions.

aes

{GGPLOT2}

Construct aesthetic mapping of a ggplot graph

theme_classic

{GGPLOT2}

A minimalistic theme with no gridlines

min

{base}

Get minimum of a vector

as.numeric

{base}

Coerce a vector to numeric

bptest

{lmtest}

Breusch-Pagan Test for Homoscedasticity

lm

{base}

Fit a linear model

pchisq

{stats}

Gives the distribution function of the chi-squared distribution

with

{base}

evaluate expression in the context of a data frame

resid

{stats}

Extracts model residuals from objects returned by modeling functions

filter

{dplyr}

Filter out rows of a data frame according to logical vector

relevel

{stats}

Reorder Levels of Factor

element_blank

{GGPLOT2}

This theme element draws nothing, and assigns no space

nobs

{gdata}

Compute the number of non-missing observations

select

{dplyr}

Select columns from a tibble/data frame

element_text

{GGPLOT2}

Customise text in GGPLOT2

chisq.test

{stats}

Chi-Squared test (e.g. for cross-tabulations)

geom_vline

{GGPLOT2}

Draws a vertical line

scale_y_continuous

{GGPLOT2}

Customise continuous y axis

ungroup

{dplyr}

Resolve grouping created with “group_by”

summary

{base}

Obtain summary statistics or detailed regression output

attach

{base}

Attach Set of R Objects to Search Path

prop.table

{base}

Transform frequency table into table of proportions

names

{base}

Retrieve names of a list/vector

ifelse

{base}

Return a or b depending on the value of test

The end!